| Position | Communities | MCPs | Projects |
---|

| Senior Lecturer at BTH | | | |

| PhD, Application Expert - Computational Fluid Dynamics | FLOW | SeRC Exascale Simulation Software Initiative - SESSI | Sessi MCP: Parallel Implementation of the Setup of an Algebraic Multigrid Solver, Sessi MCP: Code optimization for on-node performance: SIMD and LIBXSMM for small dense matrix-matrix multiplications, streaming stores for optimizing cache to memory operations, Sessi MCP: Refactoring of Nek5000, Sessi MCP: Investigation of Communication Kernel in Nek5000 |

| Associate Professor | Climate Modeling | | |

| | | Brain-IT | MCP Brain-IT: Implementing models in hardware |

| PhD | Molecular Simulation | | Molecular: Algorithms for molecular dynamics on heterogeneous architectures |

| PhD, Senior Researcher | | e-Science for Cancer Prevention and Control | MCP eCPC: eCPC WP5: Prediction and screening models |

| Professor | Molecular Simulation | | |

| | Parallel Software and Data Engineering | e-Science for Cancer Prevention and Control | MCP eCPC: eCPC WP2: Managing sensitive data in distributed environments |

| PhD | | | |

| PhD | | | FLOW: Development of subgrid models and application of large-eddy simulations |

| PhD | | | Climate: Ensemble single-column model system |

| | | Brain-IT | |

| Associate Professor | Visualization | | Visualization: Efficient Methods for Volumetric Illumination, Visualization: Clinically Applied Multivariate Volume Rendering |

| Professor in Mathematics | Numerical Analysis | | Numerical Analysis: Coarse graining of stochastic differential equations with application to wireless channel modeling, Numerical Analysis: Adaptive multilevel Monte Carlo simulation, Numerical Analysis: Calibration in mathematical finance, Numerical Analysis: Adaptive methods for subsurface flow, Numerical Analysis: Quadratic hedging, Numerical Analysis: Numerical methods for molecular dynamics |

| | | | |

| Postdoc | | Brain-IT | MCP Brain-IT: Parameter estimation, uncertainty analysis and global sensitivity analysis of intracellular neuronal models |

| PhD | Climate Modeling | | |

| Professor | FLOW, Numerical Analysis | | Numerical Analysis: A fast summation method for fiber simulations, Numerical Analysis: Numerical treatment of surfactants in multiphase flow, Numerical Analysis: Fast Ewald summation for Stokesian particle suspensions, Numerical Analysis: An accurate integral equation method for simulating multi-phase Stokes flow, FLOW and NA: Quadrature rules for boundary integral methods applied to Stokes flow, FLOW: Numerical treatment of surfactants in multiphase flow, FLOW: An accurate integral equation method for simulating multi-phase Stokes flow, Molecular: Spectrally accurate fast Ewald summation, Numerical Analysis: Multiscale methods in fluid dynamics, Numerical Analysis: Spectrally accurate fast Ewald summation |

| Associate Professor | Climate Modeling | | |

| Post-doc | Numerical Analysis | | |

| Professor | FLOW | | FLOW: Rotating channel flow at high Reynolds number, FLOW: Simulation and modelling of turbulent combustion, FLOW: Development of subgrid models and application of large-eddy simulations, FLOW: DNS of high-Reynolds number turbulent pipe flow, FLOW: Arctic Sea ice in warm climates |

| PhD | Electronic Structure | | |

| Assistant Professor | | Brain-IT | |

| | | Brain-IT | |

| Professor | Bioinformatics, NSC | | Bioinformatics: Development of automated protein family classification using hidden Markov models for functional characterization of proteins, Bioinformatics: High throughput prediction of disease caused by SNPs |

| Associate Professor | Bioinformatics | | |

| | Parallel Software and Data Engineering | | |

| Professor | Numerical Analysis | | Numerical Analysis: Computational electromagnetics in complex environments |

| PhD | | | Electronic: Multiscale Modeling Methods for Biomolecules |

| PhD, Application Expert - Computational Science | Climate Modeling, NSC, Parallel Software and Data Engineering | | |

| | Numerical Analysis | | |

| Associate Professor | Visualization | | |

| PhD | FLOW | | FLOW: Numerical simulation of generation of sound in separated internal flows |

| | Bioinformatics | | |

| PhD | | | |

| | | e-Science for Cancer Prevention and Control | |

| PhD | Parallel Software and Data Engineering | | PSDE: E-Science in Medicine – Prediction, Prognosis, and Understanding of Complex Diseases |

| PhD | Numerical Analysis | | Numerical Analysis: Iterative methods for nonlinear eigenvalue problems |

| PhD, Postdoc, leader of eCPC work package bioinformatics | | e-Science for Cancer Prevention and Control | |

| PhD | | | FLOW: Stratified wall-bounded flows |

| | | Brain-IT | |

| | | | |

| PhD | Numerical Analysis | | Numerical Analysis: Radial basis function methods for partial differential equations |

| Associate Professor | FLOW | | FLOW: Simulations of quasi-geostrophic turbulence, FLOW: Stratified wall-bounded flows |

| Professor | Bioinformatics | | Bioinformatics: Inferring functional coupling of proteins using next gen sequencing data |

| | FLOW | SeRC Exascale Simulation Software Initiative - SESSI | Sessi MCP: Code optimization for on-node performance: SIMD and LIBXSMM for small dense matrix-matrix multiplications, streaming stores for optimizing cache to memory operations, Sessi MCP: Overcoming I/O limitations on exascale architectures, Sessi MCP: OpenACC for Nek5000 |

| | | | |

| Professor | Electronic Structure | | |

| | Electronic Structure | | |

| | Climate Modeling | | |

| PhD | | e-Science for Cancer Prevention and Control | MCP eCPC: eCPC WP4: Cancer systems biology |

| | Climate Modeling | | |

| PhD | | | FLOW: WALLPART - Inertial Particles in developing wall turbulence, FLOW: Particle-laden transitional flows; small and finite-size particles, Climate: Direct numerical simulation of cloud turbulence and its interaction with cloud drops |

| | Parallel Software and Data Engineering | | |

| | Electronic Structure | | |

| PhD | FLOW | | FLOW: Rotating channel flow at high Reynolds number, FLOW: Simulation and modelling of turbulent combustion, FLOW: Development of subgrid models and application of large-eddy simulations, FLOW: DNS of high-Reynolds number turbulent pipe flow, FLOW: Stratified wall-bounded flows |

| PhD | | | |

| | | Brain-IT | |

| | Electronic Structure | | |

| Postdoc | Parallel Software and Data Engineering | | |

| Associate Professor | FLOW | | FLOW: Numerical simulation of generation of sound in separated internal flows |

| | | | |

| | Electronic Structure | | |

| PhD, Application Expert | Climate Modeling | | Climate: Treating multiple sea-ice categories in EC-EARTH |

| PhD | | | |

| Professor | Visualization | | Visualization: Visualization of MR Diffusion Data |

| Professor | Electronic Structure | | Electronic: Nucleation, stability and light-absorption of pollutant particles in the atmosphere and its climate implications |

| | | | MCP eCPC: eCPC WP3: Cancer microsimulation |

| Postdoctoral Fellow | Parallel Software and Data Engineering | | |

| PhD, Application Expert | Bioinformatics | | |

| Researcher | | | NA: Reconstruction methods for very noisy Electron Tomography data |

| PhD | | | PSDE: E-Science in Medicine – Prediction, Prognosis, and Understanding of Complex Diseases |

| | Electronic Structure | | Electronic: Exploitation of heterogeneous processor-coprocessor (CPU/CCPU) environments for high level ab initio electronic structure calculations |

| Professor | FLOW | | FLOW: Constructing non-reflecting boundaries using multiple Penalty terms |

| Professor | Data Management, Parallel Software and Data Engineering | e-Science for Cancer Prevention and Control | PSDE: Biobanking and biomedical research integration toward a global sharing of biobank resources |

| PhD | | | FLOW: Arctic Sea ice in warm climates |

| Assistant Professor | | | Molecular: Computational studies of membrane protein-ligand interactions |

| Professor | Numerical Analysis | | Numerical Analysis: Multiscale methods in fluid dynamics |

| PhD, Application Expert - Computational Fluid Dynamics | FLOW | SeRC Exascale Simulation Software Initiative - SESSI | Sessi MCP: Parallel Implementation of the Setup of an Algebraic Multigrid Solver, Sessi MCP: Code optimization for on-node performance: SIMD and LIBXSMM for small dense matrix-matrix multiplications, streaming stores for optimizing cache to memory operations, Sessi MCP: Refactoring of Nek5000, Sessi MCP: OpenACC for Nek5000 |

| | Electronic Structure | | |

| PhD, Application Expert - Bioinformatics | Bioinformatics | | Bioinformatics: Development of automated protein family classification using hidden Markov models for functional characterization of proteins |

| | Electronic Structure | | |

| Professor | Numerical Analysis | | Numerical Analysis: FEniCS-HPC, FLOW: Parallel adaptive FEM, FLOW: Numerical methods for fluid-structure interaction aero-acoustics |

| | FLOW | | FLOW: Spectral-element simulations of turbulent separation, FLOW: Large-scale simulations of turbulent flows, including transition and separation |

| PhD, Application Expert - Computational Chemistry | Electronic Structure, NSC | | |

| | | | |

| Post-doc | FLOW, Visualization | | Visualization: Assimilation of experimental and computational fluid dynamics |

| PhD, Application Expert - Parallel Programming | Application Experts, PDC | | |

| PhD Student | Bioinformatics | | |

| | Climate Modeling | | |

| PhD | | | |

| PhD | FLOW, Numerical Analysis | | Numerical Analysis: A fast summation method for fiber simulations |

| PhD | Visualization | | Visualization: POrtable Diary Data Collector |

| PhD | Climate Modeling | | Climate: Treating multiple sea-ice categories in EC-EARTH |

| Professor | Climate Modeling | | |

| Associate Professor, Electronic Structure Community Coordinator | Electronic Structure | | Electronic: Atomistic spin dynamics |

| Associate Professor | Visualization | | |

| Professor | FLOW | | |

| PhD, Researcher & Scientific Programmer | | | |

| Professor | Molecular Simulation | | Molecular: Algorithms for molecular dynamics on heterogeneous architectures |

| PhD | Electronic Structure | | Electronic: Ab initio simulation of strongly correlated materials: methods and applications |

| PhD | | | |

| Post-doc | Climate Modeling, FLOW | | |

| Application Expert - Computational Fluid Dynamics | | | |

| PhD | FLOW | | |

| Professor in Fluid Mechanics | FLOW | | FLOW: WALLPART - Inertial Particles in developing wall turbulence, FLOW: Adjoint-based linear and nonlinear optimisation in wall-bounded shear flow, FLOW: Numerical simulation of swimming micro-organisms in suspensions, FLOW: Particle-laden transitional flows; small and finite-size particles, Climate: Direct numerical simulation of cloud turbulence and its interaction with cloud drops, FLOW: Methods for Lagrangian particles in complex geometries |

| Associate Professor | Bioinformatics | | Bioinformatics: Computational optimization of mass spectrometry-based proteomics experiments |

| PhD | FLOW | | |

| PhD, Post-doc | Electronic Structure | | Electronic: Ab initio simulation of strongly correlated materials: methods and applications |

| | Molecular Simulation | | |

| Associate Professor | Visualization | | Visualization: Supporting collaborative view transformations of simulation-based data |

| GROMACS development manager | Molecular Simulation | SeRC Exascale Simulation Software Initiative - SESSI | Sessi MCP: An optimized FFT library for 3D real-valued small-size data |

| PhD | | e-Science for Cancer Prevention and Control | MCP eCPC: eCPC WP5: Prediction and screening models, MCP eCPC: eCPC WP3: Cancer microsimulation |

| Postdoctoral Researcher | Visualization | | |

| PhD | Electronic Structure | | Visualization: Organic solar cells design, Electronic: QMMM in the complex TDDFT representation, Electronic: Morphology and electro-optical properties of materials in solar cell |

| Professor in Computer Science | Parallel Software and Data Engineering | | PSDE: ENCORE, PSDE: OpCoReS - Optimized Component Runtime System |

| PhD, Postdoctoral Researcher | | | |

| PhD, Postdoctoral Researcher | Bioinformatics | | |

| PhD, Scania | FLOW | | FLOW: Wall-bounded turbulence: Re-visit using numerical experiments, FLOW: Tools for Visualisations with Simson |

| PhD | Numerical Analysis | | Numerical Analysis: Adaptive methods for subsurface flow, Numerical Analysis: Numerical methods for molecular dynamics |

| Postdoctoral Fellow | Molecular Simulation | | |

| | | e-Science for Cancer Prevention and Control | |

| Associate Professor | Numerical Analysis | | Numerical Analysis: Computational modeling of the mammalian cell, MCP Brain-IT: Multiscale modeling using the MUSIC tool |

| Professor | Climate Modeling | | |

| Postdoc | Electronic Structure | | |

| PhD, Application Expert - Neuroinformatics | | Brain-IT | MCP Brain-IT: Multiscale modeling using the MUSIC tool |

| Professor | Molecular Simulation | | Numerical Analysis: Numerical methods for molecular dynamics |

| | | | FLOW: Tools for Visualisations with Simson, FLOW: Bifurcation and stability analysis of a jet in crossflow |

| Associate Professor, Researcher | FLOW | | FLOW: Simulation of free-boundary problems and phase change, FLOW: Numerical simulation of swimming micro-organisms in suspensions |

| PhD | | | |

| Associate Professor | Electronic Structure | | |

| | | Brain-IT | |

| PhD | Climate Modeling | | |

| | | | Numerical Analysis: A fast summation method for fiber simulations, FLOW and NA: Quadrature rules for boundary integral methods applied to Stokes flow, Sessi MCP: Parallel Implementation of the Setup of an Algebraic Multigrid Solver, Sessi MCP: Code optimization for on-node performance: SIMD and LIBXSMM for small dense matrix-matrix multiplications, streaming stores for optimizing cache to memory operations, Sessi MCP: Runtime Profiling and Automatisation of Projections, Sessi MCP: Overcoming I/O limitations on exascale architectures |

| Professor | Electronic Structure | | |

| PhD, SeRC Coordinator and Researcher | | Brain-IT | MCP Brain-IT: Computational modeling of intracellular signaling cascades in the basal ganglia, MCP Brain-IT: Parameter estimation, uncertainty analysis and global sensitivity analysis of intracellular neuronal models |

| Professor | Molecular Simulation | | |

| Associate Professor | Bioinformatics | | Bioinformatics: Computational methods to assess and remedy mapping bias in allele-specific expression and genomic cis-element analysis |

| PhD | | | MCP Brain-IT: Computational modeling of intracellular signaling cascades in the basal ganglia |

| PhD | Numerical Analysis | | NA: Reconstruction methods for very noisy Electron Tomography data |

| | | Brain-IT | |

| | Visualization | | |

| | | | |

| Postdoc | Electronic Structure | | |

| | | Brain-IT | |

| | | | |

| PhD | | | MCP eCPC: eCPC WP2: Managing sensitive data in distributed environments |

| Professor in Computer Science | Parallel Software and Data Engineering | | PSDE: OPENPROD, PSDE: OpCoReS - Optimized Component Runtime System |

| Application Expert - Computational Material Science | | | |

| PhD, Post-doc | Electronic Structure | Visual Data Analytics in e-Science Applications | Electronic: Visualization tool for electronic structure calculations |

| | Bioinformatics | | |

| Professor | Parallel Software and Data Engineering | | |

| PhD | Climate Modeling | | FLOW: Simulations of turbulent boundary layers with passive scalars |

| Senior lecturer in paleoclimate modeling | Climate Modeling | | |

| PhD | Electronic Structure | | |

| Science Coordinator at Rossby Centre/SMHI; chair of the SG of EC-Earth | Climate Modeling | | |

| | Electronic Structure | | |

| Postdoc | FLOW | | Sessi MCP: Overcoming I/O limitations on exascale architectures |

| PhD | | | Numerical Analysis: An accurate integral equation method for simulating multi-phase Stokes flow, FLOW: An accurate integral equation method for simulating multi-phase Stokes flow |

| PhD | Parallel Software and Data Engineering | | |

| PhD, Application Expert - Molecular Dynamics | Molecular Simulation, PDC | SeRC Exascale Simulation Software Initiative - SESSI | |

| PhD | | | |

| | | | Molecular: Markov state models for simulation, Molecular: Distributed computing simulation, Molecular: Efficient free energy calculations for biomolecular applications |

| PhD | Bioinformatics | | |

| PhD | Numerical Analysis | | Numerical Analysis: Cut finite element methods |

| Professor in Computer Science | Parallel Software and Data Engineering | | PSDE: Vision Cloud, PSDE: Big Data Tools for Social Science |

| PhD | FLOW | | FLOW: Bifurcation and stability analysis of a jet in crossflow |

| | Numerical Analysis | | |

| Post-doc researcher | | | Bioinformatics: Using predictions to improve predictions of membrane proteins |

| Application Expert - Computational Fluid Dynamics | | | |

| Associate Professor | FLOW | | |

| PhD | FLOW | | FLOW: Rotating channel flow at high Reynolds number |

| Professor | Electronic Structure | | Electronic: Method development in studies of charge transport in organic materials |

| | Electronic Structure | | |

| Professor, Medical Visualization Subcommunity Coordinator | Visualization | | Visualization: Lagrangian Analysis of Intracardiac Blood Flow using 4D Flow MRI, Visualization: Semi-Automatic Visualization and Quantification of Intra-Cardiac 4D Flow MRI Data for Large Patient Studies, Visualization: Cardiovascular blood flow analysis, Visualization: FlowZoom: Feature-based, multi-resolution in-situ sampling of very large turbulence simulations, Visualization: Assimilation of experimental and computational fluid dynamics |

| | | e-Science for Cancer Prevention and Control | |

| | | Brain-IT | |

| Postdoctoral Researcher | | | |

| PhD, Climate Researcher | Climate Modeling | | Climate: Treating multiple sea-ice categories in EC-EARTH |

| PhD, Application Expert - Computational Chemistry | Electronic Structure, NSC | | |

| PhD | | | |

| PhD | Bioinformatics | | |

| | | | |

| PhD, Application Expert - Computational Material Science | Electronic Structure | | |

| Professor in Theoretical Chemistry | Electronic Structure | | |

| | Climate Modeling | | |

| | | | |

| Professor in Computer Science | | Brain-IT | |

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